TAP PHD in Boechera stricta

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

PHD
Alfin-like
Homeobox
zf-TAZ
ARID
zf-MIZ
zf-CCCH
HMG_box
DDT
Myb_DNA-binding
JmjC
JmjN
SWIB

(Domain names are clickable)



List of proteins (29)

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namename additionClick button to show/hide sequence: Download sequence?
Bostr.0556s0004.1.ppacid=30663561 transcript=Bostr.0556s0004.1 locus=Bostr.0556s0004 ID=Bostr.0556s0004.1.v1.2 annot-version=v1.2
Bostr.11793s0024.1.ppacid=30679044 transcript=Bostr.11793s0024.1 locus=Bostr.11793s0024 ID=Bostr.11793s0024.1.v1.2 annot-version=v1.2
Bostr.13129s0014.1.ppacid=30672863 transcript=Bostr.13129s0014.1 locus=Bostr.13129s0014 ID=Bostr.13129s0014.1.v1.2 annot-version=v1.2
Bostr.13158s0178.1.ppacid=30678480 transcript=Bostr.13158s0178.1 locus=Bostr.13158s0178 ID=Bostr.13158s0178.1.v1.2 annot-version=v1.2
Bostr.1460s0067.1.ppacid=30654589 transcript=Bostr.1460s0067.1 locus=Bostr.1460s0067 ID=Bostr.1460s0067.1.v1.2 annot-version=v1.2
Bostr.1460s0210.1.ppacid=30654766 transcript=Bostr.1460s0210.1 locus=Bostr.1460s0210 ID=Bostr.1460s0210.1.v1.2 annot-version=v1.2
Bostr.15774s0090.1.ppacid=30665941 transcript=Bostr.15774s0090.1 locus=Bostr.15774s0090 ID=Bostr.15774s0090.1.v1.2 annot-version=v1.2
Bostr.18351s0388.1.ppacid=30676540 transcript=Bostr.18351s0388.1 locus=Bostr.18351s0388 ID=Bostr.18351s0388.1.v1.2 annot-version=v1.2
Bostr.19424s0629.1.ppacid=30661675 transcript=Bostr.19424s0629.1 locus=Bostr.19424s0629 ID=Bostr.19424s0629.1.v1.2 annot-version=v1.2
Bostr.20129s0159.1.ppacid=30674184 transcript=Bostr.20129s0159.1 locus=Bostr.20129s0159 ID=Bostr.20129s0159.1.v1.2 annot-version=v1.2
Bostr.20129s0371.1.ppacid=30674081 transcript=Bostr.20129s0371.1 locus=Bostr.20129s0371 ID=Bostr.20129s0371.1.v1.2 annot-version=v1.2
Bostr.23794s0329.1.ppacid=30651224 transcript=Bostr.23794s0329.1 locus=Bostr.23794s0329 ID=Bostr.23794s0329.1.v1.2 annot-version=v1.2
Bostr.23794s0422.1.ppacid=30650891 transcript=Bostr.23794s0422.1 locus=Bostr.23794s0422 ID=Bostr.23794s0422.1.v1.2 annot-version=v1.2
Bostr.25219s0382.1.ppacid=30671663 transcript=Bostr.25219s0382.1 locus=Bostr.25219s0382 ID=Bostr.25219s0382.1.v1.2 annot-version=v1.2
Bostr.25219s0431.1.ppacid=30671874 transcript=Bostr.25219s0431.1 locus=Bostr.25219s0431 ID=Bostr.25219s0431.1.v1.2 annot-version=v1.2
Bostr.25463s0233.1.ppacid=30679890 transcript=Bostr.25463s0233.1 locus=Bostr.25463s0233 ID=Bostr.25463s0233.1.v1.2 annot-version=v1.2
Bostr.2570s0110.1.ppacid=30666467 transcript=Bostr.2570s0110.1 locus=Bostr.2570s0110 ID=Bostr.2570s0110.1.v1.2 annot-version=v1.2
Bostr.26326s0154.1.ppacid=30674921 transcript=Bostr.26326s0154.1 locus=Bostr.26326s0154 ID=Bostr.26326s0154.1.v1.2 annot-version=v1.2
Bostr.26527s0052.1.ppacid=30654156 transcript=Bostr.26527s0052.1 locus=Bostr.26527s0052 ID=Bostr.26527s0052.1.v1.2 annot-version=v1.2
Bostr.26675s0115.1.ppacid=30668357 transcript=Bostr.26675s0115.1 locus=Bostr.26675s0115 ID=Bostr.26675s0115.1.v1.2 annot-version=v1.2
Bostr.26833s0127.1.ppacid=30652859 transcript=Bostr.26833s0127.1 locus=Bostr.26833s0127 ID=Bostr.26833s0127.1.v1.2 annot-version=v1.2
Bostr.26833s0939.1.ppacid=30653200 transcript=Bostr.26833s0939.1 locus=Bostr.26833s0939 ID=Bostr.26833s0939.1.v1.2 annot-version=v1.2
Bostr.26959s0303.1.ppacid=30670971 transcript=Bostr.26959s0303.1 locus=Bostr.26959s0303 ID=Bostr.26959s0303.1.v1.2 annot-version=v1.2
Bostr.28243s0022.1.ppacid=30669698 transcript=Bostr.28243s0022.1 locus=Bostr.28243s0022 ID=Bostr.28243s0022.1.v1.2 annot-version=v1.2
Bostr.28625s0209.1.ppacid=30679394 transcript=Bostr.28625s0209.1 locus=Bostr.28625s0209 ID=Bostr.28625s0209.1.v1.2 annot-version=v1.2
Bostr.28625s0233.1.ppacid=30679119 transcript=Bostr.28625s0233.1 locus=Bostr.28625s0233 ID=Bostr.28625s0233.1.v1.2 annot-version=v1.2
Bostr.2902s0289.1.ppacid=30656007 transcript=Bostr.2902s0289.1 locus=Bostr.2902s0289 ID=Bostr.2902s0289.1.v1.2 annot-version=v1.2
Bostr.29514s0024.1.ppacid=30654957 transcript=Bostr.29514s0024.1 locus=Bostr.29514s0024 ID=Bostr.29514s0024.1.v1.2 annot-version=v1.2
Bostr.5763s0086.1.ppacid=30673527 transcript=Bostr.5763s0086.1 locus=Bostr.5763s0086 ID=Bostr.5763s0086.1.v1.2 annot-version=v1.2
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum